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1

Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity

Weirauch, Matthew T., Yang, Ally, Albu, Mihai, Cote, Atina G., Montenegro-Montero, Alejandro, Drewe, Philipp, Najafabadi, Hamed S., Lambert, Samuel A., Mann, Ishminder, Cook, Kate, Zheng, Hong, Goity,

Journal:

Year:

2014

Language:

english

File:

PDF, 3.53 MB

english, 2014

2

Evaluation of methods for modeling transcription factor sequence specificity

Weirauch, Matthew T, Cote, Atina, Norel, Raquel, Annala, Matti, Zhao, Yue, Riley, Todd R, Saez-Rodriguez, Julio, Cokelaer, Thomas, Vedenko, Anastasia, Talukder, Shaheynoor, Agius, Phaedra, Arvey, Aaro

Journal:

Nature Biotechnology

Year:

2013

Language:

english

File:

PDF, 2.05 MB

english, 2013

3

Corrigendum to “Palindromes and genomic stress fractures: Bracing and repairing the damage” [DNA Repair 5 (2006) 1146–1160]

Susanna M. Lewis, Atina G. Coté

Journal:

Year:

2007

Language:

english

File:

PDF, 108 KB

english, 2007

4

Palindromes and genomic stress fractures: Bracing and repairing the damage

Susanna M. Lewis, Atina G. Coté

Journal:

Year:

2006

Language:

english

File:

PDF, 872 KB

english, 2006

5

Genomic organization and differential splicing of the mouse and human Pcyt2 genes

Arkadi Poloumienko, Atina Coté, Angela Tie Ten Quee, Lin Zhu, Marica Bakovic

Journal:

Year:

2004

Language:

english

File:

PDF, 1.52 MB

english, 2004

6

Mus81-Dependent Double-Strand DNA Breaks at In Vivo-Generated Cruciform Structures in S. cerevisiae

Atina G. Coté, Susanna M. Lewis

Journal:

Year:

2008

Language:

english

File:

PDF, 1.41 MB

english, 2008

7

The draft genome and transcriptome ofCannabis sativa

Harm van Bakel, Jake M Stout, Atina G Cote, Carling M Tallon…

Journal:

Year:

2011

Language:

english

File:

PDF, 1.15 MB

english, 2011

8

Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins

Blair R. G. Gordon, Yifei Li, Atina Cote, Matthew T. Weirauch, Pengfei Ding, Timothy R. Hughes, William Wiley Navarre, Bin Xia and Jun Liu

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 1.17 MB

english, 2011

9

Assessing predictions of fitness effects of missense mutations in SUMO-conjugating enzyme UBE2I

Zhang, Jing, Kinch, Lisa N., Cong, Qian, Weile, Jochen, Sun, Song, Cote, Atina G., Roth, Frederick P., Grishin, Nick V.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.85 MB

english, 2017

10

A framework for exhaustively mapping functional missense variants

Weile, Jochen, Sun, Song, Cote, Atina G, Knapp, Jennifer, Verby, Marta, Mellor, Joseph C, Wu, Yingzhou, Pons, Carles, Wong, Cassandra, van Lieshout, Natascha, Yang, Fan, Tasan, Murat, Tan, Guihong, Ya

Journal:

Molecular Systems Biology

Year:

2017

Language:

english

File:

PDF, 1.54 MB

english, 2017

11

Mapping DNA damage‐dependent genetic interactions in yeast via party mating and barcode fusion genetics

Díaz‐Mejía, J Javier, Celaj, Albi, Mellor, Joseph C, Coté, Atina, Balint, Attila, Ho, Brandon, Bansal, Pritpal, Shaeri, Fatemeh, Gebbia, Marinella, Weile, Jochen, Verby, Marta, Karkhanina, Anna, Zhang

Journal:

Molecular Systems Biology

Year:

2018

Language:

english

File:

PDF, 2.24 MB

english, 2018

12

Highly Combinatorial Genetic Interaction Analysis Reveals a Multi-Drug Transporter Influence Network

Celaj, Albi, Gebbia, Marinella, Musa, Louai, Cote, Atina G., Snider, Jamie, Wong, Victoria, Ko, Minjeong, Fong, Tiffany, Bansal, Paul, Mellor, Joseph C., Seesankar, Gireesh, Nguyen, Maria, Zhou, Shiji

Journal:

Year:

2019

Language:

english

File:

PDF, 6.10 MB

english, 2019

13

A proactive genotype-to-patient-phenotype map for cystathionine beta-synthase

Sun, Song, Weile, Jochen, Verby, Marta, Wu, Yingzhou, Wang, Yang, Cote, Atina G., Fotiadou, Iosifina, Kitaygorodsky, Julia, Vidal, Marc, Rine, Jasper, JeÅ¡ina, Pavel, KoÅ¾ich, Viktor, Roth, Frederick

Journal:

Genome Medicine

Year:

2020

Language:

english

File:

PDF, 4.23 MB

english, 2020

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